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Public genomes for comparison

향후 변동될 수 있으며 다음에 보인 KRIBB 등록 균주 중 일부(별표)는 표준 균주가 아니다(KRIBB에서 이미 등록한 genome을 포함하였음; 그러나 본 프로젝트와 관련이 없을 수도 있음). 원래 <assembley accession> <name> <strain name>은 탭으로 구분되어 있었으나 복사하는 과정에서 전부 스페이스로 바뀌었다. Name은 예전에는 species + strain까지 다 포함하여 등록을 하는 경향이 있었지만 요즘은 species name으로 줄여서 등록하고 균주명은 별도로 등록하는 경향이 있다.

최종 정리일: — Haeyoung Jeong 2025/01/17 16:51

GCA_000773685.1 Acinetobacter sp. HR7*
GCA_000773675.1 Bordetella trematum HR18*
GCA_001650325.1 Exiguobacterium undae KCTC 3810
GCA_001895205.1 Vibrio injensis M12-1144
GCA_004916975.1 Paenibacillus dokdonensis YH-JAE5
GCA_001742425.1 Bacillus solimangrovi GH2-4

GCA_000773685.1 Acinetobacter sp. HR7   HR7*
GCA_001552675.1 Alicyclobacillus sendaiensis NBRC 100866        NBRC 100866
GCA_000829535.1 Bacillus badius MTCC 1458
GCA_001591605.1 Bacillus badius NBRC 15713      NBRC 15713
GCA_001742425.1 Bacillus solimangrovi   GH2-4
GCA_900078335.1 Bordetella trematum     NCTC12995
GCA_900445945.1 Bordetella trematum     NCTC12995
GCA_000773675.1 Bordetella trematum     HR18*
GCA_003710915.1 Brevibacillus invocatus JCM 12215
GCA_000525915.1 Brochothrix campestris FSL F6-1037      FSL F6-1037
GCA_900445365.1 Cytobacillus firmus     NCTC10335
GCA_001591465.1 Cytobacillus firmus NBRC 15306  NBRC 15306
GCA_002835735.1 Cytobacillus horneckiae 1P01SC
GCA_042649545.1 Cytobacillus kochii     CCUG 59877
GCA_030812975.1 Cytobacillus kochii     DSM 23667
GCA_001650325.1 Exiguobacterium undae   KCTC 3810
GCA_000620805.1 Exiguobacterium undae DSM 14481 DSM 14481
GCA_017872935.1 Formosa algae   DSM 15523
GCA_001439665.1 Formosa algae   KMM 3553
GCA_001678675.1 Gelidibacter algens     ACAM 536
GCA_003259265.1 Gelidibacter algens     DSM 12408
GCA_000025345.1 Geodermatophilus obscurus DSM 43160     DSM 43160
GCA_039544795.1 Geodermatophilus obscurus DSM 43160     NBRC 13315
GCA_020731255.1 Gordonia bronchialis    FDAARGOS_1594
GCA_900450805.1 Gordonia bronchialis    NCTC10667
GCA_000024785.1 Gordonia bronchialis DSM 43247  DSM 43247
GCA_001420715.1 Heyndrickxia shackletonii       LMG 18435
GCA_011008805.1 Heyndrickxia shackletonii       LMG 18435
GCA_040801915.1 Jeotgalibacillus marinus        DSM 1297
GCA_900478165.1 Lederbergia lenta       NCTC4824
GCA_001591545.1 Lederbergia lenta NBRC 16444    NBRC 16444
GCA_000708755.2 Metabacillus indicus LMG 22858  LMG 22858
GCA_001591585.1 Niallia circulans NBRC 13626    NBRC 13626
GCA_021532375.1 Paenibacillus alkaliterrae      DSM 17040
GCA_004001025.1 Paenibacillus amylolyticus      NBRC 15957
GCA_004117095.1 Paenibacillus chitinolyticus    KCCM 41400
GCA_026797105.1 Paenibacillus chitinolyticus    NRRL B-23119
GCA_000739915.1 Paenibacillus chitinolyticus NBRC 15660 NBRC 15660
GCA_004916975.1 Paenibacillus dokdonensis       YH-JAE5
GCA_001632305.1 Paenibacillus glucanolyticus    5162
GCA_004000885.1 Paenibacillus glucanolyticus NBRC 15330 NBRC 15330
GCA_004000805.1 Paenibacillus glycanilyticus NBRC 16618 NBRC 16618
GCA_015473105.1 Paenibacillus glycanilyticus subsp. hiroshimensis       CCI5
GCA_004000825.1 Paenibacillus kobensis NBRC 15729       NBRC 15729
GCA_001514495.1 Paenibacillus pabuli NBRC 13638 NBRC 13638
GCA_014192015.1 Paenibacillus rhizosphaerae     CECT 5831
GCA_000758685.1 Paenibacillus stellifer DSM 14472
GCA_002161855.1 Paenibacillus thiaminolyticus   NRRL B-4156
GCA_007066085.1 Paenibacillus thiaminolyticus   NRRL B-4156
GCA_004001005.1 Paenibacillus thiaminolyticus NBRC 15656 = DSM 7262     NBRC 15656
GCA_017873435.1 Paenibacillus turicensis        DSM 14349
GCA_004000985.1 Paenibacillus validus NBRC 15382        NBRC 15382
GCA_001687625.2 Planococcus maritimus   DSM 17275
GCA_000773685.1 Acinetobacter sp. HR7   HR7*
GCA_001552675.1 Alicyclobacillus sendaiensis NBRC 100866        NBRC 100866
GCA_000829535.1 Bacillus badius MTCC 1458
GCA_001591605.1 Bacillus badius NBRC 15713      NBRC 15713
GCA_001742425.1 Bacillus solimangrovi   GH2-4
GCA_900078335.1 Bordetella trematum     NCTC12995
GCA_900445945.1 Bordetella trematum     NCTC12995
GCA_000773675.1 Bordetella trematum     HR18*
GCA_003710915.1 Brevibacillus invocatus JCM 12215
GCA_000525915.1 Brochothrix campestris FSL F6-1037      FSL F6-1037
GCA_900445365.1 Cytobacillus firmus     NCTC10335
GCA_001591465.1 Cytobacillus firmus NBRC 15306  NBRC 15306
GCA_002835735.1 Cytobacillus horneckiae 1P01SC
GCA_042649545.1 Cytobacillus kochii     CCUG 59877
GCA_030812975.1 Cytobacillus kochii     DSM 23667
GCA_001650325.1 Exiguobacterium undae   KCTC 3810
GCA_000620805.1 Exiguobacterium undae DSM 14481 DSM 14481
GCA_017872935.1 Formosa algae   DSM 15523
GCA_001439665.1 Formosa algae   KMM 3553
GCA_001678675.1 Gelidibacter algens     ACAM 536
GCA_003259265.1 Gelidibacter algens     DSM 12408
GCA_000025345.1 Geodermatophilus obscurus DSM 43160     DSM 43160
GCA_039544795.1 Geodermatophilus obscurus DSM 43160     NBRC 13315
GCA_020731255.1 Gordonia bronchialis    FDAARGOS_1594
GCA_900450805.1 Gordonia bronchialis    NCTC10667
GCA_000024785.1 Gordonia bronchialis DSM 43247  DSM 43247
GCA_001420715.1 Heyndrickxia shackletonii       LMG 18435
GCA_011008805.1 Heyndrickxia shackletonii       LMG 18435
GCA_040801915.1 Jeotgalibacillus marinus        DSM 1297
GCA_900478165.1 Lederbergia lenta       NCTC4824
GCA_001591545.1 Lederbergia lenta NBRC 16444    NBRC 16444
GCA_000708755.2 Metabacillus indicus LMG 22858  LMG 22858
GCA_001591585.1 Niallia circulans NBRC 13626    NBRC 13626
GCA_021532375.1 Paenibacillus alkaliterrae      DSM 17040
GCA_004001025.1 Paenibacillus amylolyticus      NBRC 15957
GCA_004117095.1 Paenibacillus chitinolyticus    KCCM 41400
GCA_026797105.1 Paenibacillus chitinolyticus    NRRL B-23119
GCA_000739915.1 Paenibacillus chitinolyticus NBRC 15660 NBRC 15660
GCA_004916975.1 Paenibacillus dokdonensis       YH-JAE5
GCA_001632305.1 Paenibacillus glucanolyticus    5162
GCA_004000885.1 Paenibacillus glucanolyticus NBRC 15330 NBRC 15330
GCA_004000805.1 Paenibacillus glycanilyticus NBRC 16618 NBRC 16618
GCA_015473105.1 Paenibacillus glycanilyticus subsp. hiroshimensis       CCI5
GCA_004000825.1 Paenibacillus kobensis NBRC 15729       NBRC 15729
GCA_001514495.1 Paenibacillus pabuli NBRC 13638 NBRC 13638
GCA_014192015.1 Paenibacillus rhizosphaerae     CECT 5831
GCA_000758685.1 Paenibacillus stellifer DSM 14472
GCA_002161855.1 Paenibacillus thiaminolyticus   NRRL B-4156
GCA_007066085.1 Paenibacillus thiaminolyticus   NRRL B-4156
GCA_004001005.1 Paenibacillus thiaminolyticus NBRC 15656 = DSM 7262     NBRC 15656
GCA_017873435.1 Paenibacillus turicensis        DSM 14349
GCA_004000985.1 Paenibacillus validus NBRC 15382        NBRC 15382
GCA_001687625.2 Planococcus maritimus   DSM 17275
GCA_003968815.1 Staphylococcus gallinarum       NCTC 12195
GCA_003019255.1 Staphylococcus kloosii  ATCC 43959
GCA_900458805.1 Staphylococcus kloosii  NCTC12415
GCA_002902055.1 Staphylococcus kloosii  NCTC 12415
GCA_900167015.1 Succinivibrio dextrinosolvens DSM 3072  DSM 3072
GCA_001270965.1 Sunxiuqinia dokdonensis DH1
GCA_900113005.1 Sunxiuqinia elliptica   CGMCC 1.9156
GCA_001591425.1 Sutcliffiella cohnii NBRC 15565 NBRC 15565
GCA_002019665.1 Sutcliffiella halmapala DSM 8723
GCA_001895205.1 Vibrio injensis M12-1144
GCA_001189575.1 Virgibacillus pantothenticus    DSM 26
GCA_018075365.1 Virgibacillus pantothenticus    DSM 26
GCA_900156795.1 Virgibacillus pantothenticus    DSM 26
GCA_003148645.1 Xanthomarina spongicola DSM 22637