antismash
Bioconda 환경에서 antiSMASH 설치하고 활용하기
https://docs.antismash.secondarymetabolites.org/install/
# conda create -n antismash antismash # source activate antismash (antismash) # download-antismash-databases Downloading large file Pfam-A.hmm.gz. Please be patient... Downloading Pfam-A.hmm.gz finished successfully. Creating checksum of Pfam-A.hmm.gz Extraction of Pfam-A.hmm.gz finished successfully. Downloading large file clusterblast_20170105_v8_31.tar.xz. Please be patient... Downloading clusterblast_20170105_v8_31.tar.xz finished successfully. Creating checksum of clusterblast_20170105_v8_31.tar.xz Extraction of clusterblast_20170105_v8_31.tar.xz finished successfully. Extraction of clusterblast_20170105_v8_31.tar finished successfully. (antismash) # source deactivate antismash # 실행 (antismash) $ source activate antismash (antismash) $ antismash my_input.gbk
microbe server에서 시험 실행하는데 걸리는 시간(E681) real 16m19.902s user 242m16.113s sys 3m2.374s
antismash.txt · Last modified: 2021/03/17 13:09 by 127.0.0.1