antismash
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Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
antismash [2018/06/08 09:07] – hyjeong | antismash [2021/03/17 13:09] (current) – external edit 127.0.0.1 | ||
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# conda create -n antismash antismash | # conda create -n antismash antismash | ||
# source activate antismash | # source activate antismash | ||
- | # download-antismash-databases | + | |
Downloading large file Pfam-A.hmm.gz. Please be patient... | Downloading large file Pfam-A.hmm.gz. Please be patient... | ||
+ | Downloading Pfam-A.hmm.gz finished successfully. | ||
+ | Creating checksum of Pfam-A.hmm.gz | ||
+ | Extraction of Pfam-A.hmm.gz finished successfully. | ||
Downloading large file clusterblast_20170105_v8_31.tar.xz. Please be patient... | Downloading large file clusterblast_20170105_v8_31.tar.xz. Please be patient... | ||
- | # source deactivate antismash | + | |
+ | Creating checksum of clusterblast_20170105_v8_31.tar.xz | ||
+ | Extraction of clusterblast_20170105_v8_31.tar.xz finished successfully. | ||
+ | Extraction of clusterblast_20170105_v8_31.tar finished successfully. | ||
+ | (antismash) | ||
| | ||
# 실행 | # 실행 | ||
- | $ source activate antismash | + | |
- | $ antismash my_input.gbk | + | |
+ | |||
+ | microbe server에서 시험 실행하는데 걸리는 시간(E681) | ||
+ | real 16m19.902s | ||
+ | user 242m16.113s | ||
+ | sys 3m2.374s |
antismash.1528416441.txt.gz · Last modified: (external edit)