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scaffolding [2016/02/17 14:08] – external edit 127.0.0.1scaffolding [2021/03/17 13:09] (current) – external edit 127.0.0.1
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   $ SolexaQA++ dynamictrim SB_iontor.fastq –-torrent (default: P = 0.05)   $ SolexaQA++ dynamictrim SB_iontor.fastq –-torrent (default: P = 0.05)
   $ sed -n '/^@BYI6V.*\/1$/{N;N;N;p;}' SB_iontor.fastq.trimmed > SB-trimmed_1.fastq   $ sed -n '/^@BYI6V.*\/1$/{N;N;N;p;}' SB_iontor.fastq.trimmed > SB-trimmed_1.fastq
-  $ sed -n '/^@BYI6V.*\/1$/{N;N;N;p;}' SB_iontor.fastq.trimmed > SB-trimmed_1.fastq+  $ sed -n '/^@BYI6V.*\/2$/{N;N;N;p;}' SB_iontor.fastq.trimmed > SB-trimmed_2.fastq
   [optional] SolexaQA++ lengthsort SB-trimmed_1.fastq SB-trimmed_2.fastq -l 40   [optional] SolexaQA++ lengthsort SB-trimmed_1.fastq SB-trimmed_2.fastq -l 40
  
scaffolding.1455685695.txt.gz · Last modified: 2021/03/17 13:09 (external edit)